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Result folder

MISA++ framework applications write their output into a folder that contains all neccessary information to repeat the analysis.

The folder has following structure:

graph LR; A["Result folder : directory"] --> B["Parameters : file"] A --> C["Module Info : file"] A --> D["Parameter schema : file"] A --> E["Runtime log : file"] A --> G["Attachments : folder"] G --> H["Attachment serialization schemata : file"] G -.->|optional|I["imported : folder"] G -.->|optional|J["exported : folder"] I -->|For each sample| K["Input data attachments : folder"] J -->|For each sample| L["Output data attachments : folder"] A -->|For each sample|F["Sample result data : folder"]

Parameters

A file parameters.json in JSON format. A copy of the input parameter file. See Parameters for more information.

Module Info

A file misa-module-info.json in JSON format. The same as the output of of <module> --module-info. See Module Info for more information.

Parameter schema

A file parameter-schema.json in JSON format. See Parameter schema for more information.

Runtime log

A file runtime-log.json in JSON format. See Runtime log for more information.

Attachments

A folder attachments.

Attachment serialization schemata

A file serialization-schemas.json that contains serialization schemas for all attached objects. See Attachments for more information.

imported

An optional folder imported.

Input data attachments

A structure of folders that follows the data structure defined by the MISA++ application. Folders contain JSON files (extension .json). The files contain attached objects assigned to the data via the directory structure. See “Attachments” for more information.

exported

An optional folder exported.

Input data attachments

A structure of folders that follows the data structure defined by the MISA++ application. Folders contain JSON files (extension .json). The files contain attached objects assigned to the data via the directory structure. See “Attachments” for more information.

Sample result data

A structure of folders that follows the data structure defined by the MISA++ application unless folders have been redirected via the filesystem. See Parameters for more information.