J-AST Help

Installation

J-AST is available in two variants:

Desktop application

A standalone application for Windows, Linux, and macOS that runs entirely on your local machine. No server setup or database configuration is required — everything is bundled, including a Java runtime and the JIPipe image processing engine. Your data never leaves your computer.

Server deployment

A web application hosted on a server that multiple users can access through their browser. Supports user accounts, guest accounts, and shared access. Requires a MariaDB database and more configuration.

System requirements

Requirement

Desktop

Server

Operating system

Windows (x64), Linux (x64), macOS (Apple Silicon)

Linux, Windows, or macOS with Java 21

Java

Bundled (no installation required)

Java 21 (Eclipse Temurin recommended)

RAM

At least 8 GB free for image processing (16 GB+ recommended)

8 GB per concurrent JIPipe worker (16 GB+ recommended for 2 workers)

Disk space

~2 GB for the application, plus space for your image data

~2 GB for the application, plus space for image data and temporary files

Database

Embedded H2 (no setup required)

MariaDB (recommended) or embedded H2

Additional software

None — JIPipe/Fiji is bundled

JIPipe/Fiji, Xvfb (Linux), optionally R and Tesseract for OCR-based MIC analysis

Where to download

You can download the latest J-AST desktop packages and server distributions from our website.

If you prefer, you can also try out J-AST using the instance we host on our server before installing it locally.

13 July 2026